We are constantly working to make Cytely the most robust, data-driven environment for your microscopy analysis. We have rolled out three key updates designed to improve reproducibility and speed up your time-to-result.

Tweak your analysis workflow

For all newly analyzed datasets, you can now access the Workflow Builder view to inspect the exact logic behind your results.

This means you can now visualize the specific nodes (e.g., Gaussian filters, background segmentation, object measurement) used to process your images ensuring you have full transparency into how your data is being analyzed.

Replicate analysis with one click

Science relies on reproducibility. We have added the ability to replicate analysis workflows from previous experiments.

This means that if you have or get shared a workflow that worked perfectly for a specific assay (like a specific Phagocytosis or Transfection setup), you can now clone that exact logic and apply it to new datasets. This ensures consistency across experiments and saves you from reinventing the wheel.

Streamlined feedback for quicker workflows

Getting from raw image to data exploration should be seamless. We have improved the dataset submission process, making it easier to attach specific feedback and experimental context when you upload your images.

By providing detailed context upfront, you enable us to configure and deliver your bespoke analysis workflows significantly faster, letting you get to the insights sooner.

Log in today to try out the new replication features and see your analysis logic in action.

Cytely is now more powerful with three new features available to all users.

Support for multiple image formats

Cytely now supports Tiff, Zeiss, and Olympus file formats so you can seamlessly work with images from your preferred microscopy systems without conversion hassles.

Direct microscope control

With our new data-dependent acquisition (DDA) feature and direct Nikon JOBS integration, you can now control your microscope and capture images directly from Cytely. Allowing you to easily take high resolution images of cells of interest.

Precise population gating with polygon shapes

Create free-shape gates to define your exact populations of interest. Move beyond simple rectangular selections to gate the precise cell populations you need for your analysis.

See them in action in this video

These features are available now for all Cytely users. Just log in to app.cytely.io to try it out.